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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015920565.1_cds_XP_016469664.1_62194
CDS Infomation

[gene=LOC107792007] [db_xref=GeneID:107792007] [protein=ubiquitin carboxyl-terminal hydrolase 6-like] [protein_id=XP_016469664.1] [location=complement(join(21571..21626,21798..21872,21968..22087,22982..23027,23193..23288,23406..23486,25607..25676,25984..26072,26604..26712,28936..28986,29195..29262,29373..29432,29902..30028,30700..30800,31485..31592,31678..31713,31874..32019,33627..33636))] [gbkey=CDS]
Sequence

ATGGTCACAGTAAGTGTAAAGTGGCAAAAAGAAGTCTATCCTGCTGTGGAAATTGACACT
AGCCAGCCTCCTTATGTTTTCAAAGCCCAGCTGTATGATCTAACAGGGGTACCACCTGAA
AGGCAAAAGATAATGGTCAAAGGTGGTTTGCTTAAGGACGATGCCGACTGGTCGAAAGTA
GGAGTAAAAGAGGGTCAAAGGCTGATGATGATGGGAACTGCAGATGAGATTGTGAAGGCC
CCTGAAAAAGGTCCTGTTTTTGCTGAAGATTTACCTGAAGAAGAGCAAGTGGTTAATGTG
GGTCATTCTGCTGGATTATTTAATCTCGGAAATACATGCTACATGAACTCCACAGTACAG
TGCTTGCATTCAGTTCCGGAACTGAAGTCTGCTCTAACAGAGTATAACCAGCTCGGTAGA
AGCAATGATTTGGATCACTCATCTCATCTCTTGACAGTTGCAACAAGAGATCTGTTTAAT
GACCTGGATAAAAATGTCAAACCAGTGGCGCCAATGCAATTCTGGACGGTTTTGCGGAAG
AAATATCCTCAATTTGGCCAGCAGAGCAATGGAGCTTTCATGCAGCAGGATGCTGAAGAG
TGTTGGACGCAACTACTTTACACCCTTTCTCAGTCTCTTAAATCACCGAACTCTAGTGAA
AGTCCAGATATTGTGAAGGCTCTCTTTGGTATTGAGTTTGACAACAGGATTCATTGTGCT
GAAAGTGGTGAAGAAAGCACAGAAACAGAAACTGTTTATTCCCTTAAATGCCACATTTCA
CAGGAAGTGAACCATTTGCATGAAGGTTTGAAACGTGGTCTGAAATCAGAACTGGAGAAG
GCGTCCCCGTCACTTGGACGGAGTGCAGTTTATGTGAAAGACTCCCGAATCAATGGCTTG
CCAAGATACTTGACCATTCAGTTCGTCCGGTTTTTCTGGAAAAGGGAATCAAATCAAAAG
GCAAAGATTTTGCGGAAAGTGGATTACCCGCTGTCGTTGGATGTATATGATTTTTGTTCG
GAAGACCTCCGCAAGAAACTGGAAGGTCCTCGCCAGGTTTTGAGGGATGCTGAAGGTAAG
AAGGCCGGTTTAAAAACCAGTGGGAAAACTTCAAGCTCAACTGACGGCGACGTTAAAATG
ACTGAGGCTGAGGAATCATCTAGTGGAAGTGGAGAAGCATCTAAAACAACCCAAGAAGGT
GTTCTGCCTGAGAAGGAGCACCACTTGACTGGAATATATGATTTGGTGGCCGTGCTGACT
CACAAGGGAAGAAGTGCAGACTCGGGGCATTATGTTGCCTGGGTCAAGCAAGAAAACGGA
AAGTGGGTTCAATTTGATGATGACAATCCAATTCCGCAGAGAGAAGAGGACATCCCTAAA
CTTTCAGGAGGTGGTGATTGGCATATGGCTTATATTTGCGTGTACAAGGCCCGTGTAGTT
CCCATGTGA

Peptide Sequence

PEP ID

XP_016469664.1
PEP Infomation

PREDICTED: ubiquitin carboxyl-terminal hydrolase 6-like [Nicotiana tabacum]
Sequence

MVTVSVKWQKEVYPAVEIDTSQPPYVFKAQLYDLTGVPPERQKIMVKGGLLKDDADWSKV
GVKEGQRLMMMGTADEIVKAPEKGPVFAEDLPEEEQVVNVGHSAGLFNLGNTCYMNSTVQ
CLHSVPELKSALTEYNQLGRSNDLDHSSHLLTVATRDLFNDLDKNVKPVAPMQFWTVLRK
KYPQFGQQSNGAFMQQDAEECWTQLLYTLSQSLKSPNSSESPDIVKALFGIEFDNRIHCA
ESGEESTETETVYSLKCHISQEVNHLHEGLKRGLKSELEKASPSLGRSAVYVKDSRINGL
PRYLTIQFVRFFWKRESNQKAKILRKVDYPLSLDVYDFCSEDLRKKLEGPRQVLRDAEGK
KAGLKTSGKTSSSTDGDVKMTEAEESSSGSGEASKTTQEGVLPEKEHHLTGIYDLVAVLT
HKGRSADSGHYVAWVKQENGKWVQFDDDNPIPQREEDIPKLSGGGDWHMAYICVYKARVV
PM

Transcript Sequence

Gene sequence data has not been registered.